CalyxOS implements many random 3rd party stuff as if that was their own.
Apart from 2 (QKSMS and Bromite) being unmaintained, installing random apps as system apps (if this is what they do) means a system update may cause data loss for users, when removing those apps. And it has the problem of a way too high goal that can not be reached. They simply dont maintain those apps, so dont ship them.
Thanks, I dont think the common tools are dangerous to work with the original, but I now have 3 backups in various approaches and will wait until I find a solution on how to restore header files, as this seems to be kinda impossible to recover ("secure delete")
We dont live in such a perfect world. Linux has a small marketshare for non-server software, so packaging is done by your distro.
You would need to have user-facing settings for Apparmor or SELinux to replicate what already exists with Flatpak.
Principle of least privilege.
Maybe you prefer native packages, but bubblejail or SELinux confined users are complicated as hell and both are pre-alpha in my experience.
So yes you add bloat, dependencies etc. But you also add stability, a small core system, take load of OS developers and unify the packaging efforts so that it is done by developers not packagers.
This reduces complexity a lot, as the underlying system is not as important anymore, and you can just use whatever you want. Software is separated from the OS.
The small drive is nearly empty, just has a few files, those where deleted. The drive is now unuses, used testdisk, photorec, recuva now scalpel to get anything from it.
Cough
If you want something actually useful